CDS

Accession Number TCMCG017C15509
gbkey CDS
Protein Id OMO92524.1
Location complement(join(27249..27488,27759..27894,28044..28171,28265..28619,28788..29015,29274..29617))
GeneID InterPro:IPR002208
Organism Corchorus olitorius
locus_tag COLO4_17507

Protein

Length 476aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01016353.1
Definition SecY/SEC61-alpha family [Corchorus olitorius]
Locus_tag COLO4_17507

EGGNOG-MAPPER Annotation

COG_category OU
Description Belongs to the SecY SEC61-alpha family
KEGG_TC 3.A.5.4,3.A.5.8,3.A.5.9
KEGG_Module M00401        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko02044        [VIEW IN KEGG]
KEGG_ko ko:K10956        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03060        [VIEW IN KEGG]
ko04141        [VIEW IN KEGG]
ko04145        [VIEW IN KEGG]
ko05110        [VIEW IN KEGG]
map03060        [VIEW IN KEGG]
map04141        [VIEW IN KEGG]
map04145        [VIEW IN KEGG]
map05110        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005215        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0006605        [VIEW IN EMBL-EBI]
GO:0006612        [VIEW IN EMBL-EBI]
GO:0006620        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008320        [VIEW IN EMBL-EBI]
GO:0008565        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015399        [VIEW IN EMBL-EBI]
GO:0015405        [VIEW IN EMBL-EBI]
GO:0015450        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0022804        [VIEW IN EMBL-EBI]
GO:0022857        [VIEW IN EMBL-EBI]
GO:0022884        [VIEW IN EMBL-EBI]
GO:0031204        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0042887        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045047        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0055085        [VIEW IN EMBL-EBI]
GO:0065002        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0070972        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071806        [VIEW IN EMBL-EBI]
GO:0072594        [VIEW IN EMBL-EBI]
GO:0072599        [VIEW IN EMBL-EBI]
GO:0072657        [VIEW IN EMBL-EBI]
GO:0090150        [VIEW IN EMBL-EBI]
GO:1904680        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGGGGAGGATTTAGAGTGCTTCATCTTGTGAGACCGTTTCTGTCATTTCTGCCTGAAGTTCAGAGTGCTGACAGGAAGGTTCCCTTCAGGGAGAAGGTCATATACACTGTGATCTCTCTTTTTATTTTCTTGGTTTGTAGCCAGCTGCCACTGTATGGCATACATTCAACAACTGGCGCAGATCCATTCTATTGGATGCGTGTTATTCTTGCTTCAAGTCGTGGGACTGTTATGGAGCTTGGAATCACTCCCATTGTGACATCTGGACTGGTGATGCAACTCCTTGCCGGTTCGAAGATCATTGAAGTGGACAACAATGTTCGTGAAGATCGTGCCCTGTTAAATGGTGCACAAAAGTTGTTGGGACTCTTGATAGCCATTGGCGAAGCAGTTGCCTATGTTCTCTCAGGAATGTATGGTAGTGTTGGCCAACTTGGAGTAGGAAATGCCATTCTGATTATCCTTCAACTTTGCTTTGCTGGTATCATTGTTATATGTCTTGACGAGCTTCTTCAGAAAGGATATGGTCTAGGCTCTGGAATTTCCCTTTTCATAGCAACCAATATCTGTGAAAATATAATCTGGAAGGCATTTAGCCCCACAACCATCAACAGTGGCAGAGGTGCTGAGTTTGAAGGAGCTATTATTTGTTTGTTCCATAACATCTTAACTCGAGACAACAAGATTCGTGGTCTCCGAGAAGCCTTCTATCGGCAGAACCTTCCAAATGTGACAAATTTGCTTGCTACAGTATTGGTTTTCCTAATTGTTATCTATTTCCAAGGGTTCCGCGTGGTTCTGCCTGTTAGGTCAAAGAATGCCCGTGGGCAACAGGGTTCATATCCTATCAAGCTGTTTTACACTTCTAACATGCCCATCATTCTACATTCTGCTCTTGTTACCAACCTCTACTTCATTTCTCAGTTGCTCTACAGGAGGTACAGTGGAAACTTTATTGTGAATCTCTTGGGCCAGTGGAAGGAATCTGAATATTCAAATGGTCAATCCATTCCTGTTGGTGGCCTTGCATATTACATCACTGCACCATCAAGCTTAGCTGATATGGCAGCCAATCCTTTTCATGCTCTGTTCTATCTTGTGTTCATGTTGTCAGCATGTGCATTGTTCTCAAAGACTTGGATTGAAGTTTCTGGATCATCTGCTAGAGATGTTGCCAAGCAGCTCAGGGAACAACAAATGGTTATGCCCGGACACCGTGAGGCAAGCTTACAGAAAGAGTTGAACCGCTACATACCCACTGCTGCTGCATTTGGAGGCATGTGCATTGGTGCACTCACAGTATTGGCAGATTTTATGGGGGCAATCGGGTCGGGAACTGGTATTCTTCTTGCAGTCACCATTATTTACCAATACTTCGAGACATTTGAGAAGGAGAAGGCCAGTGAACTTGGTCTCTTTGGGTTCTAG
Protein:  
MGGGFRVLHLVRPFLSFLPEVQSADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASSRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGLLIAIGEAVAYVLSGMYGSVGQLGVGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICENIIWKAFSPTTINSGRGAEFEGAIICLFHNILTRDNKIRGLREAFYRQNLPNVTNLLATVLVFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILHSALVTNLYFISQLLYRRYSGNFIVNLLGQWKESEYSNGQSIPVGGLAYYITAPSSLADMAANPFHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLREQQMVMPGHREASLQKELNRYIPTAAAFGGMCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKEKASELGLFGF